PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG031532.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family CAMTA
Protein Properties Length: 986aa    MW: 110093 Da    PI: 5.3883
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG031532.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1174.51.5e-54131273116
         CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 
                  +e ++rwlk+ e++ iL+n++k+++t+e+ ++p+sgsl+L+n++++r+fr+DG+sw+kkkdg+tv E+he+LKvg+ve+++cyYah+e+np+fqrr+y
  CCG031532.1  13 EEaQTRWLKPAEVLFILQNHDKYQFTKEPLQKPTSGSLFLFNKRILRFFRRDGHSWRKKKDGRTVGEAHERLKVGNVETINCYYAHGEQNPNFQRRSY 110
                  55599********************************************************************************************* PP

         CG-1 100 wlLeeelekivlvhyle 116
                  w+L+ ++e+ivlvhy+e
  CCG031532.1 111 WMLDPAFEHIVLVHYRE 127
                  ***************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.4228134IPR005559CG-1 DNA-binding domain
SMARTSM010763.0E-7511129IPR005559CG-1 DNA-binding domain
PfamPF038598.5E-4814127IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.1E-9420510IPR013783Immunoglobulin-like fold
PfamPF018339.8E-10425508IPR002909IPT domain
CDDcd001021.47E-5425509No hitNo description
SuperFamilySSF812965.6E-19426509IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.1E-15621717IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.618623715IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.35E-16625717IPR020683Ankyrin repeat-containing domain
CDDcd002044.16E-9643715No hitNo description
PfamPF127966.8E-7644716IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.381656688IPR002110Ankyrin repeat
SMARTSM002484.4E-4656685IPR002110Ankyrin repeat
SMARTSM0001518773795IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.51774803IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.2E-8776879IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.24827849IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.95828857IPR000048IQ motif, EF-hand binding site
PfamPF006120.021830848IPR000048IQ motif, EF-hand binding site
SMARTSM000154.8E-5850872IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.956851875IPR000048IQ motif, EF-hand binding site
PfamPF006124.0E-5853872IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 986 aa     Download sequence    Send to blast
MLQSGYDINS LFEEAQTRWL KPAEVLFILQ NHDKYQFTKE PLQKPTSGSL FLFNKRILRF  60
FRRDGHSWRK KKDGRTVGEA HERLKVGNVE TINCYYAHGE QNPNFQRRSY WMLDPAFEHI  120
VLVHYREISE GKPSPGSAAQ LSPGFSYSPS SNTSQTQGSS SATSGVYEQH QSLSSPASVE  180
VNSGLDIKDN GVDSAAELTS FANNNVTQCL RRLEEQLSLN EDNIKEIGSF GGVEGATNDS  240
KILEYTNHIS KEDQSKNLHR GSQFIVDYQC YGGLSGKQLE RSNLAPLQDA GDSGAYQQSY  300
SQYYTDGSKE DLSWNEVFES YETSSGIEYQ VKYMETEKPK SSLMMETAQE QENSLWINFA  360
ETNVGNSSLL LPQEFEGFET PTYSSVIETH ENNADCYAML YDQGHLGIPI EADSSLTVAQ  420
QQKFSIREIS PEWGYATEAT KVIIVGSFLC DPSESSWTCM FGDTEVPLQI IQEGVIRCEA  480
PPHQPGKVTL CITSGNRESC SEIRDFDYRA EDSSCAHCNF SQTEASKSPE ELLLLVRFVQ  540
MLLSDSSLQR GDNIETGIHL LQKLKADDDS WGYIIEALLV GSGTSSTTVD WLLQQLLKDK  600
LRQWLSSKSQ EEHDHPGCSL SKKEQGIIHM VAGLGFEWAL SPILSHGVSI NFRDINGWTA  660
LHWAARFGRE KMVAALLASG ASAGAVTDPS SKDPIGKTAA SIAASGGHKG LAGYLSEVAL  720
TSHLSSLRLE ESELSKGSAE IEAERAVDSI SKVSFAANED QVSLKDTLAA VRNAAQAAAR  780
IQSAFRAHSF RKRQEIEASI LDEYGISAGD IQGLSAMSKL AFRNSQDINS AALSIQKKYR  840
GWKGRKDFLE LRQKVVKIQA HVRGYRVRKN YKVICWAVGI LDKVVLRWRR KGIGLRGFRN  900
EMESIDERED DDILKMFRKQ KVDGTIDEAF SRVLSMVDSP DARQQYRRML QRYRQAKDEL  960
GTSEAAASTS LADANEMEND DLYRFQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011020768.10.0PREDICTED: calmodulin-binding transcription activator 4
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLU5GPG60.0U5GPG6_POPTR; Calmodulin-binding family protein
STRINGPOPTR_0001s13700.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains